About Enhancer
| Enhancer ID: | E_03226 |
| Species: | Mus musculus |
| Position : | chr5:29641240-29642424   |
| Year: | 2016 |
| Title: | The Shh Topological Domain Facilitates the Action of Remote Enhancers by Reducing the Effects of Genomic Distances |
| Genome Build: | mm10 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| Disease Name: | -- |
| PMID: | 27867070 |
| MONDO: | |
| Tissue: | Limb bud |
| Tissue Ontology ID: | UBERON:0005417 |
| Cell Source: | E11.5 embryonic limb bud cells |
| CVCL ID: | |
| Cell Type: | limb bud cell |
| Cell Ontology ID: | CL:0000000 |
| Experiment Type: | Enhancer activity assay, Chromatin interaction assay, Functional perturbation assay |
| High Throughput Method: | 4C-seq |
| Low Throughput Method: | LacZ transgenic reporter assay, Cre-loxP genome rearrangement, RT-RT-qPCR, Whole-mount in situ hybridization, Skeletal preparation |
About Target Gene
| Target gene : | Shh |
About TF
| TF name : |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer Associated Network
Overlapping Enhancers (mm10)
1 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_03225 | chr5:29641240-29642424 | Limb bud | mouse embryonic stem cell | -- |
Expression of Target Genes for the Enhancer