Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03270
Species: Homo sapiens
Position : chr8:128000000-128300000
Year: 2016
Title: CCAT1 is an enhancer-templated RNA that predicts BET sensitivity in colorectal cancer.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: colorectal cancer
PMID:  26752646
MONDO: MONDO:0005575
Tissue: colon
Tissue Ontology ID: UBERON:0001155
Cell Source: CRC cells
Cell Type: malignant cell
Cell Ontology ID: CL:0001064
Experiment Type: Super-enhancer functional analysis; In vivo functional validation
High Throughput Method: H3K27ac ChIP-seq; RNA-seq; CRISPR screen
Low Throughput Method: CRISPR perturbation; BET inhibition; expression assay; In vivo phenotyping
About Target Gene
Target gene : MYC
About TF
TF name : BRD4
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 17 found
Enhancer ID Position Tissue Cell Disease
E_01136 chr8:128130000-128300000 lymphoid tissue B cell mantle cell lymphoma
E_01137 chr8:128130000-128300000 lymphoid tissue B cell mantle cell lymphoma
E_01138 chr8:128130000-128300000 lymphoid tissue B cell mantle cell lymphoma
E_01139 chr8:128130000-128300000 lymphoid tissue B cell mantle cell lymphoma
E_01140 chr8:128130000-128300000 lymphoid tissue B cell mantle cell lymphoma
E_01141 chr8:128130000-128300000 lymphoid tissue B cell mantle cell lymphoma
E_01816 chr8:128132902-128133724 kidney malignant cell renal cell carcinoma
E_01850 chr8:128132902-128133724 kidney kidney proximal tubule epithelial cell NA
E_03952 chr8:128140000-128145000 colon malignant cell colorectal cancer
E_04622 chr8:128173203-128174158 prostate gland malignant cell prostate cancer
E_02985 chr8:128206162-128314310 colon NA NA
E_02910 chr8:128220000-128250000 heart cardiac muscle cell NA
E_02916 chr8:128220000-128250000 blood lymphoblastoid cell NA
E_03391 chr8:128230172-128243000 colon NA colorectal cancer
E_01855 chr8:128230503-128232194 colon epithelial cell colorectal carcinoma
E_04578 chr8:128296257-128297326 NA NA NA
E_04577 chr8:128299198-128301336 NA NA NA
Expression of Target Genes for the Enhancer