About Enhancer
| Enhancer ID: | E_03277 |
| Species: | Homo sapiens |
| Position : | chr9:137494462-137494862   |
| Year: | 2024 |
| Title: | Functional dissection of human cardiac enhancers and noncoding de novo variants in congenital heart disease. |
| Genome Build: | hg38 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 38378865 |
| Tissue: | endometrium |
| Tissue Ontology ID: | UBERON:0001295 |
| Cell Source: | 1390C1 |
| CVCL ID: | CVCL_UP48 |
| Cell Type: | endometrial stromal cell |
| Experiment Type: | CRISPR interference (CRISPRi) |
| High Throughput Method: | lentiSTARR-seq, lentiMPRA, scATAC-seq; MPRA; whole-genome sequencing |
| Low Throughput Method: | RT-RT-qPCR; FACS; EMSA; Reporter assay |
About Target Gene
| Target gene : | COL5A1 |
About TF
| TF name : | THRA |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| THRA | Nuclear Receptor transcription pathway | reactome | 51 |
| THRA | RXR and RAR heterodimerization with other nuclear receptor | pid | 26 |
| THRA | Neuroactive ligand-receptor interaction | kegg | 272 |
| THRA | Hs_Endochondral_Ossification_WP474_87977 | wikipathways | 43 |
| THRA | Hs_Urea_cycle_and_metabolism_of_amino_groups_WP497_72142 | wikipathways | 8 |
Enhancer Associated Network
Overlapping Enhancers (hg38)
4 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_03273 | chr9:137494462-137494862 | endometrium | endometrial stromal cell | NA |
| E_03274 | chr9:137494462-137494862 | endometrium | endometrial stromal cell | NA |
| E_03275 | chr9:137494462-137494862 | endometrium | endometrial stromal cell | NA |
| E_03276 | chr9:137494462-137494862 | endometrium | endometrial stromal cell | NA |
Expression of Target Genes for the Enhancer