Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03346
Species: Homo sapiens
Position : chr5:148785000-148815000
Year: 2015
Title: CARMEN, a human super enhancer-associated long noncoding RNA controlling cardiac specification, differentiation and homeostasis.
Genome Build: hg19
Enhancer Type: Super-enhancer
Condition: Normal
PMID:  26423156
Tissue: heart
Tissue Ontology ID: UBERON:0000948
Cell Source: Cardiac Progenitor Cell
Experiment Type: Enhancer activity assay; TF-binding/chromatin assay; Chromatin interaction assay; In vivo functional validation
High Throughput Method: ChIP-seq
Low Throughput Method: Luciferase reporter assay; Reporter assay; ChIP-qPCR/ChIP; Histology/immunostaining
About Target Gene
Target gene : NKX2-5
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 1 found
Enhancer ID Position Tissue Cell Disease
E_03388 chr5:148781015-148839604 heart cardiac progenitor cell NA
Expression of Target Genes for the Enhancer