Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03503
Species: Homo sapiens
Position : chr12:47732000-47733500
Year: 2017
Title: Harnessing BET Inhibitor Sensitivity Reveals AMIGO2 as a Melanoma Survival Gene
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: skin melanoma
PMID:  29149598
MONDO: MONDO:0005105
Tissue: Skin
Tissue Ontology ID: UBERON:0000014
Cell Source: SKmel147
CVCL ID: CVCL_3876
Cell Type: melanoma cell
Cell Ontology ID: CL:0002573
Experiment Type: Enhancer activity assay, Functional perturbation assay
High Throughput Method: ChIP-seq, ATAC-seq, RNA-seq
Low Throughput Method: Luciferase Reporter Assay, CRISPR Knockout, RT-RT-qPCR
About Target Gene
Target gene : AMIGO2
About TF
TF name : FOSL2
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
FOSL2 AP-1 transcription factor network pid 71
FOSL2 Gene expression of IL2 by AP-1 ( CD4 T cell receptor signaling (JNK cascade) ) inoh 5
FOSL2 Gene expression of IL2 by AP-1 ( CD4 T cell receptor signaling ) inoh 5
FOSL2 JNK cascade ( CD4 T cell receptor signaling (JNK cascade) ) inoh 12
FOSL2 JNK cascade ( CD4 T cell receptor signaling ) inoh 10
FOSL2 Validated transcriptional targets of AP1 family members Fra1 and Fra2 pid 37
FOSL2 Validated transcriptional targets of deltaNp63 isoforms pid 47
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_00206 chr12:47732000-47733500 Cervical Epithelium cervical adenocarcinoma cell cervical cancer
E_00207 chr12:47732000-47733500 Colon colorectal carcinoma cell colorectal cancer
E_03502 chr12:47732000-47733500 Ovary ovarian carcinoma cell ovarian carcinoma
Expression of Target Genes for the Enhancer