About Enhancer
| Enhancer ID: | E_03524 |
| Species: | Homo sapiens |
| Position : | chr3:128322357-128323157   |
| Year: | 2021 |
| Title: | Identification of therapeutic targets of the hijacked super-enhancer complex in EVI1-rearranged leukemia. |
| Genome Build: | hg19 |
| Enhancer Type: | Enhancer |
| Condition: | Disease |
| Disease Name: | MECOM-rearranged acute myeloid leukemia |
| PMID: | 33911178 |
| MONDO: | MONDO:0018874 |
| Tissue: | bone marrow |
| Tissue Ontology ID: | UBERON:0002371 |
| Cell Source: | HNT-34 |
| CVCL ID: | CVCL_2071 |
| Cell Type: | malignant cell |
| Cell Ontology ID: | CL:0001064 |
| Experiment Type: | TF-complex dissection at a hijacked enhancer; enhancer-promoter interaction; functional TF perturbation |
| High Throughput Method: | CEBPA ChIP-seq; RUNX1/CEBPA ChIP-SICAP; RNA-seq; 4C-seq |
| Low Throughput Method: | Luciferase assay; TF-site mutagenesis; TF knockdown/perturbation; RT-qPCR |
About Target Gene
| Target gene : | MECOM |
About TF
| TF name : | RUNX1 |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| RUNX1 | AndrogenReceptor | netpath | 167 |
| RUNX1 | Organic cation transport | reactome | 9 |
| RUNX1 | RANKL | netpath | 84 |
| RUNX1 | Regulation of nuclear SMAD2/3 signaling | pid | 82 |
| RUNX1 | TGF_beta_Receptor | netpath | 220 |
| RUNX1 | Validated transcriptional targets of deltaNp63 isoforms | pid | 47 |
| RUNX1 | Pathways in cancer | kegg | 321 |
| RUNX1 | Chronic myeloid leukemia | kegg | 69 |
| RUNX1 | Acute myeloid leukemia | kegg | 53 |
Enhancer Associated Network
Overlapping Enhancers (hg19)
41 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_03426 | chr3:128322357-128323157 | bone marrow | malignant cell | acute myeloid leukemia with inv(3)/t(3; 3); MECOM-rearranged AML |
| E_03427 | chr3:128322357-128323157 | bone marrow | malignant cell | acute myeloid leukemia with inv(3)/t(3; 3); MECOM-rearranged AML |
| E_03428 | chr3:128322357-128323157 | bone marrow | malignant cell | acute myeloid leukemia with inv(3)/t(3; 3); MECOM-rearranged AML |
| E_03429 | chr3:128322357-128323157 | bone marrow | malignant cell | acute myeloid leukemia with inv(3)/t(3; 3); MECOM-rearranged AML |
| E_03430 | chr3:128322357-128323157 | bone marrow | malignant cell | acute myeloid leukemia with inv(3)/t(3; 3); MECOM-rearranged AML |
| E_03431 | chr3:128322357-128323157 | bone marrow | malignant cell | acute myeloid leukemia with inv(3)/t(3; 3); MECOM-rearranged AML |
| E_03504 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03505 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03506 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03507 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03508 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03509 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03510 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03511 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03512 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03513 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03514 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03515 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03516 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03517 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03518 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03519 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03520 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03521 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03522 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_03523 | chr3:128322357-128323157 | bone marrow | malignant cell | MECOM-rearranged acute myeloid leukemia |
| E_01351 | chr3:128322411-128323124 | Bone marrow / hematopoietic system | myeloid leukemia cell | Acute myeloid leukemia with MECOM rearrangement [inv(3)(q21;q26.2)/t(3;3)(q21;q26.2)] |
| E_01372 | chr3:128322411-128323124 | bone marrow | myeloid leukemia cell | acute myeloid leukemia |
| E_01373 | chr3:128322411-128323124 | blood | myeloid leukemia cell | acute myeloid leukemia |
| E_01382 | chr3:128322411-128323124 | peripheral blood | AML hematopoietic progenitor-like leukemia cell | acute myeloid leukemia |
| E_01383 | chr3:128322411-128323124 | bone marrow | malignant cell | acute myeloid leukemia |
| E_01394 | chr3:128322411-128323124 | bone marrow | myeloid leukemia cell | acute myeloid leukemia |
| E_01395 | chr3:128322411-128323124 | blood | myeloid leukemia cell | acute myeloid leukemia |
| E_01396 | chr3:128322411-128323124 | bone marrow | myeloid leukemia cell | acute myeloid leukemia |
| E_01397 | chr3:128322411-128323124 | blood | myeloid leukemia cell | acute myeloid leukemia |
| E_01403 | chr3:128322411-128323124 | peripheral blood | AML hematopoietic progenitor-like leukemia cell | acute myeloid leukemia |
| E_01404 | chr3:128322411-128323124 | peripheral blood | AML hematopoietic progenitor-like leukemia cell | acute myeloid leukemia |
| E_03530 | chr3:128322411-128323124 | Bone marrow / hematopoietic system | myeloid leukemia cell | Acute myeloid leukemia with MECOM rearrangement [3q-AML] |
| E_03531 | chr3:128322411-128323124 | Bone marrow / hematopoietic system | myeloid leukemia cell | Acute myeloid leukemia with MECOM rearrangement [3q-AML] |
| E_03532 | chr3:128322411-128323124 | Bone marrow / hematopoietic system | myeloid leukemia cell | Acute myeloid leukemia with MECOM rearrangement [3q-AML] |
| E_03533 | chr3:128322411-128323124 | Bone marrow / hematopoietic system | myeloid leukemia cell | Acute myeloid leukemia with MECOM rearrangement [3q-AML] |
Expression of Target Genes for the Enhancer