Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03810
Species: Homo sapiens
Position : chr2:223164458-223164688
Year: 2016
Title: FOXD3 Promotes PAX3 Expression in Melanoma Cells.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: Melanoma
PMID:  26252164
MONDO: MONDO:0005105
Tissue: skin
Tissue Ontology ID: UBERON:0002097
Cell Source: Melanoma
Cell Type: malignant cell
Cell Ontology ID: CL:0001064
Experiment Type: Enhancer activity assay; TF-binding/chromatin assay; Disease-associated enhancer analysis
Low Throughput Method: Luciferase reporter assay; Reporter assay; ChIP-qPCR/ChIP; EMSA/gel-shift assay
About Target Gene
Target gene : PAX3
About TF
TF name : FOXD3
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
FOXD3 POU5F1 (OCT4), SOX2, NANOG activate genes related to proliferation reactome 13
FOXD3 Hs_Neural_Crest_Differentiation_WP2064_79263 wikipathways 40
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_03706 chr2:223164458-223165065 skin of body malignant cell melanoma
E_03707 chr2:223164458-223165065 skin of body malignant cell melanoma
E_03812 chr2:223164458-223164688 zone of skin melanoma cell cutaneous melanoma
Expression of Target Genes for the Enhancer