Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03941
Species: Homo sapiens
Position : chr3:188892648-189232665
Year: 2013
Title: Discovery and characterization of super-enhancer-associated dependencies in diffuse large B cell lymphoma.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: diffuse large B-cell lymphoma
PMID:  24332044
MONDO: MONDO:0018905
Tissue: blood / hematopoietic system
Tissue Ontology ID: UBERON:0000178
Cell Source: B-Cell Lymphoma Cell Lines
Cell Type: B cell
Cell Ontology ID: CL:0000236
Experiment Type: TF-binding/chromatin assay; Disease-associated enhancer analysis
High Throughput Method: ChIP-seq
Low Throughput Method: ChIP-qPCR/ChIP; RT-qPCR/qPCR
About Target Gene
Target gene : BCL6
About TF
TF name : E2F1
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
E2F1 Activation of PUMA and translocation to mitochondria reactome 8
E2F1 Association of licensing factors with the pre-replicative complex reactome 15
E2F1 Calcineurin-regulated NFAT-dependent transcription in lymphocytes pid 50
E2F1 CDC6 association with the ORC:origin complex reactome 11
E2F1 Cyclin D associated events in G1 reactome 38
E2F1 Direct p53 effectors pid 141
E2F1 E2F mediated regulation of DNA replication reactome 17
E2F1 E2F transcription factor network pid 77
E2F1 G0 and Early G1 reactome 25
E2F1 G1/S-Specific Transcription reactome 17
E2F1 G2 Phase reactome 5
E2F1 IL2 signaling events mediated by PI3K pid 38
E2F1 Inhibition of replication initiation of damaged DNA by RB1/E2F1 reactome 12
E2F1 Notch-mediated HES/HEY network pid 48
E2F1 Oncogene Induced Senescence reactome 30
E2F1 Oxidative Stress Induced Senescence reactome 120
E2F1 p75(NTR)-mediated signaling pid 74
E2F1 Pre-NOTCH Transcription and Translation reactome 29
E2F1 Regulation of retinoblastoma protein pid 67
E2F1 Regulation of Telomerase pid 70
E2F1 TP53 Regulates Transcription of Genes Involved in G1 Cell Cycle Arrest reactome 13
E2F1 Cell cycle kegg 124
E2F1 Pathways in cancer kegg 321
E2F1 Pancreatic cancer kegg 70
E2F1 Glioma kegg 65
E2F1 Prostate cancer kegg 85
E2F1 Melanoma kegg 69
E2F1 Bladder cancer kegg 38
E2F1 Chronic myeloid leukemia kegg 69
E2F1 Small cell lung cancer kegg 83
E2F1 Non-small cell lung cancer kegg 54
E2F1 Hs_DNA_Damage_Response_WP707_82937 wikipathways 28
E2F1 Hs_miRNA_Regulation_of_DNA_Damage_Response_WP1530_84694 wikipathways 28
E2F1 Hs_miRNAs_involved_in_DNA_damage_response_WP1545_84697 wikipathways 30
E2F1 Hs_Endochondral_Ossification_WP474_87977 wikipathways 43
E2F1 Hs_Integrated_Breast_Cancer_Pathway_WP1984_82941 wikipathways 122
E2F1 Hs_Integrated_Cancer_Pathway_WP1971_82939 wikipathways 33
E2F1 Hs_DNA_IR-Double_Strand_Breaks_(DSBs)_and_cellular_response_via_ATM_WP3959_91367 wikipathways 50
E2F1 Hs_Bladder_Cancer_WP2828_89143 wikipathways 17
E2F1 Hs_Signaling_Pathways_in_Glioblastoma_WP2261_89520 wikipathways 16
E2F1 Hs_Aryl_Hydrocarbon_Receptor_WP2586_91687 wikipathways 16
E2F1 Hs_Fatty_Acid_Beta_Oxidation_WP143_79783 wikipathways 14
E2F1 Hs_EGF-EGFR_Signaling_Pathway_WP437_79266 wikipathways 107
Enhancer Associated Network
Overlapping Enhancers (hg19) 4 found
Enhancer ID Position Tissue Cell Disease
E_04747 chr3:189109942-189219942 breast NA Breast Cancer
E_04751 chr3:189109942-189219942 breast NA Breast Cancer
E_04748 chr3:189203942-189313942 breast NA Breast Cancer
E_04752 chr3:189203942-189313942 breast NA Breast Cancer
Expression of Target Genes for the Enhancer