Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03973
Species: Mus musculus
Position : chr3:127641624-127642545
Year: 2015
Title: Genome-wide characterisation of Foxa1 binding sites reveals several mechanisms for regulating neuronal differentiation in midbrain dopamine cells.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  25804738
Tissue: brain
Tissue Ontology ID: UBERON:0000955
Cell Source: Embryonic Stem Cell
Experiment Type: TF-binding/chromatin assay; In vivo functional validation
High Throughput Method: ChIP-seq; RNA-seq
Low Throughput Method: ChIP-qPCR/ChIP; RT-qPCR/qPCR; Transgenic/LacZ assay
About Target Gene
Target gene : Neurog2
About TF
TF name : Otx2
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm10) 2 found
Enhancer ID Position Tissue Cell Disease
E_03971 chr3:127641624-127642545 brain NA NA
E_03972 chr3:127641624-127642545 brain NA NA
Expression of Target Genes for the Enhancer