About Enhancer
| Enhancer ID: | E_04016 |
| Species: | Mus musculus |
| Position : | chrX:7230000-7720000   |
| Year: | 2019 |
| Title: | PCGF6 regulates stem cell pluripotency as a transcription activator via super-enhancer dependent chromatin interactions. |
| Genome Build: | mm10 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 31041782 |
| Tissue: | embryo |
| Tissue Ontology ID: | UBERON:0000922 |
| Cell Source: | Mouse embryonic stem cells (mESCs) |
| Cell Type: | mouse embryonic stem cell |
| Cell Ontology ID: | CL:0002322 |
| Experiment Type: | Enhancer activity assay, TF binding assay, Chromatin interaction assay, Functional perturbation assay |
| High Throughput Method: | ChIP-seq; RNA-seq; Hi-C; Capture Hi-C |
| Low Throughput Method: | RT-RT-qPCR; Western blot |
About Target Gene
| Target gene : | Tfe3 |
About TF
| TF name : | NA |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer Associated Network
Overlapping Enhancers (mm10)
15 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_02129 | chrX:7566060-7568152 | NA | NA | NA |
| E_02137 | chrX:7566060-7568152 | spleen | CD4-positive, alpha-beta T cell | NA |
| E_02138 | chrX:7566060-7568152 | lymph node | CD4-positive, alpha-beta T cell | NA |
| E_02130 | chrX:7570463-7571424 | NA | NA | NA |
| E_02134 | chrX:7570463-7571424 | spleen | CD4-positive, alpha-beta T cell | NA |
| E_02135 | chrX:7570463-7571424 | lymph node | CD4-positive, alpha-beta T cell | NA |
| E_02115 | chrX:7573447-7575334 | spleen | CD4-positive, alpha-beta T cell | NA |
| E_02116 | chrX:7573447-7575334 | lymph node | CD4-positive, alpha-beta T cell | NA |
| E_02131 | chrX:7573447-7575334 | NA | NA | NA |
| E_02132 | chrX:7579185-7580141 | NA | NA | NA |
| E_02139 | chrX:7579185-7580141 | spleen | CD4-positive, alpha-beta T cell | NA |
| E_02140 | chrX:7579185-7580141 | lymph node | CD4-positive, alpha-beta T cell | NA |
| E_02133 | chrX:7583853-7584485 | blood / immune system | T cell | NA |
| E_02141 | chrX:7583853-7584485 | spleen | regulatory T cell | NA |
| E_02142 | chrX:7583853-7584485 | lymph node | regulatory T cell | NA |
Expression of Target Genes for the Enhancer