Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04055
Species: Homo sapiens
Position : chr2:79272263-79272447
Year: 2019
Title: LncRNA REG1CP promotes tumorigenesis through an enhancer complex to recruit FANCJ helicase for REG3A transcription.
Genome Build: hg38
Enhancer Type: Enhancer
Condition: Disease
Disease Name: cancer (subtype not defined in abstract)
PMID:  31767869
Tissue: colon
Tissue Ontology ID: UBERON:0001155
Cell Source: LIM1215
CVCL ID: CVCL_2574
Cell Type: malignant cell
Cell Ontology ID: CL:0001064
Experiment Type: Enhancer activity assay, TF binding assay, Functional perturbation assay
High Throughput Method: RNA-seq, ChIP-seq
Low Throughput Method: Luciferase Reporter Assay, ChIP-RT-qPCR, RT-RT-qPCR, Western blot, EMSA, shRNA Knockdown
About Target Gene
Target gene : REG3A
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg38) 2 found
Enhancer ID Position Tissue Cell Disease
E_04054 chr2:79272263-79272447 colon malignant cell cancer (subtype not defined in abstract)
E_04056 chr2:79272263-79272447 colon malignant cell cancer (subtype not defined in abstract)
Expression of Target Genes for the Enhancer