Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04061
Species: Mus musculus
Position : chr17:26850487-26850997
Year: 2016
Title: Desmin enters the nucleus of cardiac stem cells and modulates Nkx2.5 expression by participating in transcription factor complexes that interact with the nkx2.5 gene.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  26787680
Tissue: heart
Tissue Ontology ID: UBERON:0000948
Cell Source: Cardiac progenitor cells from differentiating embryoid bodies
Cell Type: cardiac muscle myoblast
Cell Ontology ID: CL:0000513
Experiment Type: Enhancer activity assay; Chromatin occupancy assay; Functional perturbation assay
Low Throughput Method: Luciferase Reporter Assay; ChIP-PCR/ChIP-qPCR; Desmin knockdown/overexpression; RT-qPCR; Western blot; Co-immunoprecipitation
About Target Gene
Target gene : Nkx2-5
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm10) 2 found
Enhancer ID Position Tissue Cell Disease
E_02173 chr17:26850487-26851000 outflow tract cardiac muscle cell conotruncal heart malformations
E_02174 chr17:26850487-26851000 outflow tract cardiac muscle cell conotruncal heart malformations
Expression of Target Genes for the Enhancer