Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04135
Species: Homo sapiens
Position : chr7:156583796-156584568
Year: 2003
Title: A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: preaxial polydactyly
PMID:  12837695
MONDO: MONDO:0021003
Tissue: limb
Tissue Ontology ID: UBERON:0002101
Cell Source: affected families
Cell Type: limb mesenchymal cell
Experiment Type: Human pathogenic regulatory-variant mapping; long-range developmental enhancer validation
High Throughput Method: Genetic linkage/mutation mapping; comparative genomics
Low Throughput Method: Transgenic enhancer reporter; developmental expression analysis
About Target Gene
Target gene : SHH
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 5 found
Enhancer ID Position Tissue Cell Disease
E_04133 chr7:156583402-156585773 limb bud limb-bud mesenchymal cell preaxial polydactyly II
E_04137 chr7:156583402-156585773 limb bud limb bud mesenchymal cell preaxial polydactyly
E_04063 chr7:156583796-156584568 limb bud limb bud mesenchymal cell preaxial polydactyly II
E_04134 chr7:156583796-156584568 limb limb mesenchymal cell preaxial polydactyly
E_04136 chr7:156583796-156584568 limb limb mesenchymal cell preaxial polydactyly
Expression of Target Genes for the Enhancer