About Enhancer
| Enhancer ID: | E_04183 |
| Species: | Mus musculus |
| Position : | chr11:35813868-35814943   |
| Year: | 2014 |
| Title: | 5mC oxidation by Tet2 modulates enhancer activity and timing of transcriptome reprogramming during differentiation. |
| Genome Build: | mm10 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 25263596 |
| Cell Source: | Tet2-/- |
| Experiment Type: | TF-binding/chromatin assay; In vivo functional validation |
| High Throughput Method: | ChIP-seq |
| Low Throughput Method: | ChIP-qPCR/ChIP; Transgenic/LacZ assay |
About Target Gene
| Target gene : | Slit3 |
About TF
| TF name : | Nanog |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| Nanog | POU5F1 (OCT4), SOX2, NANOG activate genes related to proliferation | reactome | 13 |
| Nanog | POU5F1 (OCT4), SOX2, NANOG repress genes related to differentiation | reactome | 10 |
| Nanog | Transcriptional regulation of pluripotent stem cells | reactome | 28 |
Enhancer Associated Network
Expression of Target Genes for the Enhancer