Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04362
Species: Mus musculus
Position : chr4:44520195-44520234
Year: 2009
Title: Stepwise activation of enhancer and promoter regions of the B cell commitment gene Pax5 in early lymphopoiesis.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  19345119
Tissue: blood / hematopoietic system
Tissue Ontology ID: UBERON:0000178
Cell Source: Lymphopoiesis B Cell
Cell Type: B cell
Cell Ontology ID: CL:0000236
Experiment Type: Enhancer activity assay; TF-binding/chromatin assay; In vivo functional validation
Low Throughput Method: ChIP-qPCR/ChIP; EMSA/gel-shift assay; Transgenic/LacZ assay
About Target Gene
Target gene : Pax5
About TF
TF name : Irf4
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Irf4 Calcineurin-regulated NFAT-dependent transcription in lymphocytes pid 50
Irf4 IL4-mediated signaling events pid 66
Irf4 Interferon alpha/beta signaling reactome 67
Irf4 Interferon gamma signaling reactome 88
Irf4 Hs_B_Cell_Receptor_Signaling_Pathway_WP23_89900 wikipathways 71
Enhancer Associated Network
Overlapping Enhancers (mm10) 3 found
Enhancer ID Position Tissue Cell Disease
E_04363 chr4:44520195-44520234 blood / hematopoietic system B cell NA
E_04364 chr4:44520195-44520234 blood / hematopoietic system B cell NA
E_04365 chr4:44520195-44520234 blood / hematopoietic system B cell NA
Expression of Target Genes for the Enhancer