Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04411
Species: Homo sapiens
Position : chr17:69541883-69542989
Year: 2017
Title: Altered SOX9 genital tubercle enhancer region in hypospadias.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Normal
PMID:  27989796
Cell Source: TM4
Experiment Type: Enhancer activity assay; In vivo functional validation
Low Throughput Method: Luciferase reporter assay; Reporter assay; Transgenic/LacZ assay; Histology/immunostaining
About Target Gene
Target gene : SOX9
About TF
TF name : SOX9
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
SOX9 Deactivation of the beta-catenin transactivating complex reactome 42
SOX9 TGF_beta_Receptor netpath 220
SOX9 Hs_Neural_Crest_Differentiation_WP2064_79263 wikipathways 40
SOX9 Hs_Spinal_Cord_Injury_WP2431_87678 wikipathways 21
Enhancer Associated Network
Overlapping Enhancers (hg19) 2 found
Enhancer ID Position Tissue Cell Disease
E_04449 chr17:69541883-69542989 mesonephric mesenchyme genital-tubercle mesenchymal cell hypospadias
E_04451 chr17:69541883-69542989 mesonephric mesenchyme genital-tubercle mesenchymal cell hypospadias
Expression of Target Genes for the Enhancer