Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04421
Species: Homo sapiens
Position : chr14:90847327-90849327
Year: 2012
Title: Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: Congenital Limb Deformity
PMID:  22265404
Tissue: blood / hematopoietic system
Tissue Ontology ID: UBERON:0000178
Cell Source: HCT 116
CVCL ID: CVCL_0291
Cell Type: malignant cell
Cell Ontology ID: CL:0001064
Experiment Type: Enhancer activity assay; TF-binding/chromatin assay; Chromatin interaction assay; Disease-associated enhancer analysis
High Throughput Method: ChIP-seq
Low Throughput Method: Luciferase reporter assay; Reporter assay; ChIP-qPCR/ChIP; 3C; RT-qPCR/qPCR
About Target Gene
Target gene : CALM1
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 4 found
Enhancer ID Position Tissue Cell Disease
E_04419 chr14:90847327-90849327 blood / hematopoietic system malignant cell Congenital Limb Deformity
E_04420 chr14:90847327-90849327 blood / hematopoietic system malignant cell Congenital Limb Deformity
E_04430 chr14:90847327-90849327 blood / hematopoietic system malignant cell Congenital Limb Deformity
E_04431 chr14:90847327-90849327 blood / hematopoietic system NA Congenital Limb Deformity
Expression of Target Genes for the Enhancer