Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04587
Species: Mus musculus
Position : chr2:75208104-75210328
Year: 2018
Title: Similarities and differences in the regulation of HoxD genes during chick and mouse limb development.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  30475793
Tissue: limb
Tissue Ontology ID: UBERON:0002101
Cell Source: E10.5-E12.5 limb bud cells
Cell Type: limb bud mesenchymal cell
Experiment Type: Enhancer activity assay; Chromatin interaction assay; Developmental gene-regulation assay
High Throughput Method: RNA-seq; ChIP-seq; 4C-seq
Low Throughput Method: Lentiviral transgenic LacZ reporter assay; X-gal staining; RT-qPCR; whole-mount in situ hybridization
About Target Gene
Target gene : Hoxd11
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm10) 2 found
Enhancer ID Position Tissue Cell Disease
E_02009 chr2:75208104-75210328 limb embryonic limb mesenchyme NA
E_04586 chr2:75208104-75210328 limb limb bud mesenchymal cell NA
Expression of Target Genes for the Enhancer