Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04590
Species: Danio rerio
Position : chr2:535659-535798
Year: 2022
Title: CRISPR-Cas9-mediated functional dissection of the foxc1 genomic region in zebrafish identifies critical conserved cis-regulatory elements.
Genome Build: danRer11
Enhancer Type: Enhancer
Condition: Normal
PMID:  36284357
Tissue: embryo
Tissue Ontology ID: UBERON:0000922
Cell Source: embryonic cell
Cell Type: embryonic cell
Experiment Type: Functional perturbation assay
Low Throughput Method: CRISPR Knockout; qRT-PCR; Whole-mount in situ hybridization; CRISPR-Cas9
About Target Gene
Target gene : foxc1a
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (danRer11)
No overlapping enhancers found in danRer11 at this locus.
Expression of Target Genes for the Enhancer