About Enhancer
| Enhancer ID: | E_04770 |
| Species: | Homo sapiens |
| Position : | chr17:42078767-42079095   |
| Year: | 2012 |
| Title: | Transcriptional regulation of N-acetylglutamate synthase. |
| Genome Build: | hg19 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 22383952 |
| Tissue: | liver |
| Tissue Ontology ID: | UBERON:0002107 |
| Cell Source: | Hep-G2 |
| CVCL ID: | CVCL_0027 |
| Cell Type: | epithelial cell |
| Cell Ontology ID: | CL:0000066 |
| Experiment Type: | Enhancer activity assay;TF binding assay |
| Low Throughput Method: | Dual-luciferase reporter assay;site-directed mutagenesis;DNA-protein pull-down;ChIP-qPCR |
About Target Gene
| Target gene : | NAGS |
About TF
| TF name : | NFYA |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| NFYA | Activation of gene expression by SREBF (SREBP) | reactome | 42 |
| NFYA | ATF4 activates genes | reactome | 25 |
| NFYA | ATF6-alpha activates chaperone genes | reactome | 10 |
| NFYA | Direct p53 effectors | pid | 141 |
| NFYA | PPARA activates gene expression | reactome | 113 |
| NFYA | TGF_beta_Receptor | netpath | 220 |
| NFYA | Validated targets of C-MYC transcriptional repression | pid | 63 |
| NFYA | Antigen processing and presentation | kegg | 75 |
Enhancer Associated Network
Overlapping Enhancers (hg19)
9 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_03068 | chr17:42078635-42079129 | liver | hepatocyte | NA |
| E_04769 | chr17:42078767-42079095 | liver | epithelial cell | NA |
| E_04785 | chr17:42078767-42079095 | liver | epithelial cell | NA |
| E_03116 | chr17:42078768-42079095 | liver | hepatocyte-lineage cell | hyperammonemia due to N-acetylglutamate synthase deficiency |
| E_03121 | chr17:42078768-42079095 | liver | malignant cell | hyperammonemia due to N-acetylglutamate synthase deficiency |
| E_04778 | chr17:42078865-42079198 | liver | hepatocyte | NA |
| E_04779 | chr17:42078865-42079198 | liver | hepatocyte | NA |
| E_04780 | chr17:42078865-42079198 | liver | hepatocyte | NA |
| E_03164 | chr17:42078932-42079032 | NA | NA | NA |
Expression of Target Genes for the Enhancer