Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04771
Species: Homo sapiens
Position : chr4:100078375-100078940
Year: 2010
Title: Identification of a FOXA-dependent enhancer of human alcohol dehydrogenase 4 (ADH4)
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Normal
PMID:  20363298
Tissue: liver
Tissue Ontology ID: UBERON:0002107
Cell Source: HepG2
CVCL ID: CVCL_0027
Cell Type: malignant cell
Cell Ontology ID: CL:0001064
Experiment Type: Reporter-based enhancer mapping; TF-binding and site-mutation validation
Low Throughput Method: Luciferase reporter assay; EMSA; antibody supershift; site-directed TF-binding-site mutagenesis; haplotype/variant reporter analysis
About Target Gene
Target gene : ADH4
About TF
TF name : FOXA1
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
FOXA1 AndrogenReceptor netpath 167
FOXA1 Direct p53 effectors pid 141
FOXA1 FOXA1 transcription factor network pid 45
FOXA1 FOXA2 and FOXA3 transcription factor networks pid 45
FOXA1 Hs_Endoderm_Differentiation_WP2853_88152 wikipathways 62
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_04772 chr4:100078375-100078940 liver malignant cell NA
E_04773 chr4:100078375-100078940 liver malignant cell NA
E_04774 chr4:100078375-100078940 liver malignant cell NA
Expression of Target Genes for the Enhancer