Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_04851
Species: Mus musculus
Position : chr7:46352720-46353957
Year: 2013
Title: eRNAs promote transcription by establishing chromatin accessibility at defined genomic loci.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  23993744
Cell Source: C2C12
CVCL ID: CVCL_0188
Experiment Type: TF-binding/chromatin assay
High Throughput Method: ChIP-seq; RNA-seq
Low Throughput Method: ChIP-qPCR/ChIP; RT-qPCR/qPCR; RNAi/siRNA/shRNA
About Target Gene
Target gene : Myod1
About TF
TF name : Myod1
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Myod1 C-MYB transcription factor network pid 87
Myod1 CDO in myogenesis reactome 29
Myod1 ID netpath 38
Myod1 Notch-mediated HES/HEY network pid 48
Myod1 Regulation of nuclear SMAD2/3 signaling pid 82
Myod1 Regulation of retinoblastoma protein pid 67
Myod1 Signaling events mediated by HDAC Class III pid 41
Myod1 Hs_ID_signaling_pathway_WP53_67360 wikipathways 8
Enhancer Associated Network
Overlapping Enhancers (mm10) 5 found
Enhancer ID Position Tissue Cell Disease
E_03362 chr7:46351197-46355693 NA NA NA
E_03402 chr7:46351197-46355694 skeletal muscle tissue myoblast NA
E_04849 chr7:46352720-46353957 NA NA NA
E_04850 chr7:46352720-46353957 NA NA NA
E_04852 chr7:46352720-46353957 NA NA NA
Expression of Target Genes for the Enhancer