Gene Overview
| Target Gene: | Bnc1 |
| NCBI Official Symbol: | Bnc1 |
| Entrez ID: | 12173 |
| Ensembl ID: | ENSMUSG00000025105 |
| Gene Full Name: | basonuclin 1 |
| Strand: | - |
| Gene Locus: | 7|7 D3 |
| External Links: |
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Bnc1 Significantly Regulated by These T(co)Fs
T(co)Fs
that Activate Bnc1
T(co)Fs
that Repress Bnc1
The Intensity of the Gene Regulated by T(co)Fs:
Bnc1-T(co)F Pairs
| Target Gene |
T(co)F | Knock -Method |
Tissue Type | Biosample Name |
Fold Change |
Log2FC | P-value | Corrected _P |
Dataset ID |
|---|---|---|---|---|---|---|---|---|---|
| Bnc1 | Arid1a | knockout | Liver | Liver | 1.51316 | 0.597569 | 0.219626242838066 | 0.999999999999956 | DataSet_11_004 |
| Bnc1 | Arid1a | knockout | Ovary | Ovary | 2.31332 | 1.20997 | 0.138533369082754 | 0.94648870498129 | DataSet_11_005 |
| Bnc1 | Bcl6 | knockout | Bone_marrow | Bone marrow-derived macrophages | 0.536496 | -0.89836 | 0.249525129297812 | 0.620849412999751 | DataSet_11_014 |
| Bnc1 | Bhlha9 | knockout | Limb | Whole limb bud | 2.08547 | 1.06037 | - | - | DataSet_11_016 |
| Bnc1 | Cbx2 | knockout | Gonads | Embryonic gonads | 2.83412 | 1.5029 | 1.76076831132516e-09 | 1.99563363634947e-07 | DataSet_11_018 |
| Bnc1 | Cebpb | knockout | Mammary_gland | Mammary epithlial cells (MECs) | 3.54922 | 1.8275 | 0.086926244318929 | 0.999788745984441 | DataSet_11_020 |
| Bnc1 | Elf5 | knockout | Mammary_gland | Mammary gland | 2.17977 | 1.12418 | 0.123471400277979 | 0.409616172931151 | DataSet_11_035 |
| Bnc1 | Foxk1 | shRNA | Embryo | MEFs | 0.614296 | -0.702994 | 4.14263681997479e-05 | 0.00521141781078788 | DataSet_11_042 |
| Bnc1 | Foxp1 | knockout | Eye | Lens | 0.634615 | -0.656046 | - | - | DataSet_11_044 |
| Bnc1 | Foxq1 | siRNA | Mammary_gland | NM18 | 0.407501 | -1.29512 | 0.000286180819116149 | 0.00414421623948975 | DataSet_11_045 |
| Bnc1 | Gata3 | siRNA | Peripheral_blood | CD4+ T helper (Th) cells | 5.92521 | 2.56687 | 0.0176832491214318 | 0.987135756219234 | DataSet_11_048 |
| Bnc1 | Gata5 | knockout | Lung | Left lung | 0.599778 | -0.7375 | 0.0182854645133895 | 0.100545816403025 | DataSet_11_051 |
| Bnc1 | Gfi1 | knockout | Cord_Blood | T-cells | 0.54056 | -0.887472 | 0.243957258719523 | 0.642841680730195 | DataSet_11_053 |
| Bnc1 | Irf6 | knockout | Skin | Skin | 1.78559 | 0.836402 | 0.000241577256411155 | 0.0231987023644573 | DataSet_11_062 |
| Bnc1 | Lhx8 | knockout | Gonads | Oocytes | 0.31128 | -1.68371 | 0.0718216427144681 | 0.993830266659981 | DataSet_11_069 |
| Bnc1 | Lmx1b | knockout | Limb | Proximal limb | 1.62027 | 0.696232 | 0.0038597176272417 | 0.27181762518956 | DataSet_11_071 |
| Bnc1 | Lmx1b | knockout | Kidney | Kidney | 0.423106 | -1.24091 | 0.530391087326235 | 0.788489206394584 | DataSet_11_072 |
| Bnc1 | Mbd1 | siRNA | Adipose_tissue | 3T3-L1 cells | 1.91133 | 0.934577 | - | - | DataSet_11_074 |
| Bnc1 | Mkx | knockout | Tooth | PDL | 0.643369 | -0.636282 | 0.554819253465537 | 0.999970897748702 | DataSet_11_083 |
| Bnc1 | Nelfb | knockout | Embryo | Embryonic fibroblasts | 0.574569 | -0.799448 | 9.82420088314227e-06 | 0.000787674867267867 | DataSet_11_086 |
| Bnc1 | Neurod1 | knockout | Eye | Retina | 1.83131 | 0.872877 | 0.0393352599705813 | 0.140664246043073 | DataSet_11_088 |
| Bnc1 | Nrf1 | knockdown | Liver | Liver | 0.664066 | -0.590601 | 0.042569912663435 | 0.106055541543177 | DataSet_11_096 |
| Bnc1 | Pax6 | knockout | Embryo | Surface ectoderm | 2.40398 | 1.26543 | 0.284997615661449 | 0.813222617794085 | DataSet_11_101 |
| Bnc1 | Pitx2 | knockout | Eye | Cornea | 0.477027 | -1.06786 | 0.647040425001276 | 0.874458179389554 | DataSet_11_103 |
| Bnc1 | Prox1 | knockout | Liver | Liver | 1.63665 | 0.710749 | - | - | DataSet_11_109 |
| Bnc1 | Rest | knockout | Brain | Brain | 2.37313 | 1.24679 | 0.106989620460013 | 1 | DataSet_11_113 |
| Bnc1 | Runx1 | knockout | Bone_marrow | KSL cells | 1.55132 | 0.6335 | 0.0599333028233717 | 0.798313228002072 | DataSet_11_115 |
| Bnc1 | Sall1 | knockout | Kidney | Kidney | 1.97427 | 0.981323 | 0.538441500957818 | 0.721411007554426 | DataSet_11_121 |
| Bnc1 | Smad4 | siRNA | Brain | bEnd3 | 6.39666 | 2.67732 | - | - | DataSet_11_127 |
| Bnc1 | Smad4 | knockout | Aorta | Aortic arteries | 4.95181 | 2.30796 | 0.0642958248551531 | 0.376083499282909 | DataSet_11_128 |
| Bnc1 | Snai1 | knockout | Embryo | Embryoid body | 0.0513776 | -4.28272 | - | - | DataSet_11_129 |
| Bnc1 | Snai1 | knockout | Embryo | Embryonic stem cells (ESCs) | 0.49083 | -1.0267 | 0.0478282484374662 | 0.999994003527217 | DataSet_11_132 |
| Bnc1 | Sox11 | knockout | Eye | Retina | 0.396396 | -1.33498 | - | - | DataSet_11_137 |
| Bnc1 | Sox21 | knockout | Tooth | Incisor | 0.518594 | -0.947324 | - | - | DataSet_11_142 |
| Bnc1 | Spdef | knockout | Colon | Colon | 0.30753 | -1.7012 | 0.184968484132086 | 0.997507742354799 | DataSet_11_146 |
| Bnc1 | Spdef | knockout | Stomach | Stomach | 1.7498 | 0.807194 | 0.767063019045809 | 0.965441009208438 | DataSet_11_147 |
| Bnc1 | Stat3 | knockout | Lung | Lung typeII cells | 0.500391 | -0.998871 | 0.0655396806527429 | 0.693103902256895 | DataSet_11_151 |
| Bnc1 | Vdr | knockout | Skin | Skin | 0.563407 | -0.82775 | - | - | DataSet_11_176 |
| Bnc1 | Wt1 | siRNA | Embryo_kidney | LB-22 | 0.530302 | -0.915113 | 0.000220836811001323 | 0.00761654902198938 | DataSet_11_179 |
| Bnc1 | Dnmt1 | siRNA | Pituitary_gland | AtT-20 | 1.97049 | 0.978557 | 6.942646e-02 | 0.9999923 | DataSet_11_187 |
| Bnc1 | Pogz | knockdown | Liver | fetal liver | 0.423668 | -1.23899 | 4.219475e-01 | 0.6802445 | DataSet_11_188 |
| Bnc1 | Cpeb1 | siRNA | Neuron | Neuro-2a | 6.98621 | 2.80451 | - | - | DataSet_11_189 |
| Bnc1 | Dnmt1 | knockout | Embryo | Embryonic fibroblasts | 32.0849 | 5.00382 | 3.364711e-06 | 4.538675e-04 | DataSet_11_192 |
| Bnc1 | Dnmt1 | shRNA | Embryo | Embryonic fibroblasts | 14.5882 | 3.86673 | - | - | DataSet_11_196 |
| Bnc1 | Smarca4 | shRNA | Embryo | ES cells | 24.3678 | 4.60691 | - | - | DataSet_11_224 |
| Bnc1 | Smarca4 | shRNA | Embryo | ES cells | 24.3678 | 4.60691 | - | - | DataSet_11_225 |
| Bnc1 | Bcl11b | knockout | Main_olfactory_epithelium | main olfactory epithelium (MOE) | 0.443038 | -1.1745 | - | - | DataSet_11_207 |
| Bnc1 | Dnmt3a | siRNA | Embryo | iPSC | 0.308785 | -1.69533 | - | - | DataSet_11_241 |
| Bnc1 | Kat6a | knockout | Embryo | Embryonic fibroblasts | 0.235156 | -2.08831 | 3.826762e-04 | 0.0141977340 | DataSet_11_245 |
| Bnc1 | Fubp1 | shRNA | Brain | brain neural progenitors | 0.375842 | -1.4118 | 0.3105400230 | 1 | DataSet_11_246 |
| Bnc1 | Ezh2 | knockout | Calvaria | calvaria | 0.4 | -1.32193 | 4.417734e-01 | 0.67898253 | DataSet_11_247 |
| Bnc1 | Dnmt1 | siRNA | Embryo | Embryo | 4.16667 | 2.05889 | - | - | DataSet_11_248 |
| Bnc1 | Kmt2d | knockout | Skin | iBiP melanoma mouse model tumor cell | 11.2526 | 3.49218 | 4.491194e-06 | 2.263673e-04 | DataSet_11_250 |
| Bnc1 | Kdm2a | CRISPR | Embryo | ES cells | 2 | 1 | 0.2836771289 | 1.0000000 | DataSet_11_251 |
| Bnc1 | Eed | knockout | Brain | Forebrain | 0.603867 | -0.727697 | 6.436038e-01 | 8.739849e-01 | DataSet_11_258 |
| Bnc1 | Eed | knockout | Brain | hindbrain | 2.06732 | 1.04776 | 1.299948e-01 | 9.999914e-01 | DataSet_11_259 |
| Bnc1 | Arhgap35 | knockout | Ventral_spinal_cord | Ventral spinal cord | 1.58333 | 0.662965 | 7.190597e-01 | 1.000000000 | DataSet_11_264 |
| Bnc1 | Dux | knockout | Embryo | Embryo | 3.82105 | 1.93397 | 1.364991e-06 | 4.632595e-05 | DataSet_11_269 |
| Bnc1 | Myc | CRISPR | Skeletal_muscle | muscle stem cells | 5.5476 | 2.47186 | 1.473774e-01 | 0.81420760 | DataSet_11_272 |
| Bnc1 | Dux | knockout | Embryo | Embryo | 3.82105 | 1.93397 | 1.364981e-06 | 4.632107e-05 | DataSet_11_273 |
| Bnc1 | Myod1 | CRISPR | Skeletal_muscle | myoblast | 0.635985 | -0.652936 | 9.667569e-02 | 2.079616e-01 | DataSet_11_275 |
| Bnc1 | Ssrp1 | CRISPR | Embryo | ES cells | 7 | 2.80735 | 4.838010e-02 | 0.7762809 | DataSet_11_278 |
| Bnc1 | Usp7 | knockout | Embryo | ES cells | 5 | 2.32193 | 6.474219e-03 | 0.2150674 | DataSet_11_279 |
| Bnc1 | Pdx1 | CRISPR | Liver | Liver | 1.55556 | 0.63743 | 8.849318e-01 | 0.939626475 | DataSet_11_286 |
| Bnc1 | Usp7 | siRNA | Embryo | ES cells | 11.5 | 3.52356 | 3.179060e-02 | 0.6667924 | DataSet_11_287 |
| Bnc1 | Mkl1 | knockout | Bone_marrow | Bone marrow differentiated macrophages | 2 | 1 | 4.987205e-01 | 0.7297449485 | DataSet_11_294 |
| Bnc1 | Tfap2a | knockout | Brain | Brain | 0.5 | -1 | 0.4540384436 | 1.0000000 | DataSet_11_295 |
| Bnc1 | Ssrp1 | CRISPR | Embryo | ES cells | 5 | 2.32193 | 1.798528e-01 | 0.50167292 | DataSet_11_296 |
| Bnc1 | Esr1 | knockout | Liver | Liver | 1.52137 | 0.605369 | 1.791031e-01 | 1.0000000 | DataSet_11_307 |
| Bnc1 | Tbx20 | knockdown | Heart | primary cardiac fibroblasts | 1.87629 | 0.907882 | 2.268562e-02 | 0.77378391 | DataSet_11_309 |
| Bnc1 | Myc | CRISPR | Skeletal_muscle | quiescent muscle stem cell | 755.026 | 9.56038 | 3.409576e-01 | 0.80359421 | DataSet_11_310 |
| Bnc1 | Actl6a | knockout | Nerve | sciatic nerve | 1.66667 | 0.736966 | 5.715840e-01 | 0.761797513 | DataSet_11_314 |
| Bnc1 | Ahr | knockout | Liver | Liver | 0.263158 | -1.926 | 1.872774e-01 | 0.5895562762 | DataSet_11_315 |
| Bnc1 | Kat7 | knockout | Thymic_lobes | Thymic epithelial cells | 0.585133 | -0.773164 | 1.028297e-02 | 2.734726e-01 | DataSet_11_319 |
| Bnc1 | Setdb1 | shRNA | Neuron | NE-4C | 0.186229 | -2.42485 | - | - | DataSet_11_323 |
| Bnc1 | Tet1 | siRNA | Embryo | Embryonic fibroblasts | 3.66667 | 1.87447 | 5.260282e-02 | 0.9609895 | DataSet_11_327 |
| Bnc1 | Ezh2 | knockout | Eye | Retina | 0.116279 | -3.10434 | 1.941956e-06 | 2.409983e-04 | DataSet_11_333 |
| Bnc1 | Dnmt3a | knockout | Peritoneum | peritoneal macrophages | 0.420939 | -1.24832 | - | - | DataSet_11_336 |
| Bnc1 | Dnmt1 | siRNA | Heart | embryonic cardiomyocytes | 0.574871 | -0.798691 | 1.399778e-02 | 0.034669866 | DataSet_11_340 |
| Bnc1 | Dnmt1 | knockout | Kidney | kidney Cap Mesenchyme | 2.78481 | 1.47758 | 3.246913e-01 | 6.022949e-01 | DataSet_11_344 |
| Bnc1 | Gata4 | CRISPR | Heart | primary cardiac fibroblasts | 1.87629 | 0.907882 | 2.268562e-02 | 0.77378391 | DataSet_11_347 |
Regulation Region
Expression Atlas of Bnc1