Gene Overview
Target Gene: BARX1
NCBI Official Symbol: BARX1
Entrez ID: 56033
Ensembl ID: ENSG00000131668
Gene Full Name: BARX homeobox 1
Strand: -
Gene Locus: 9q22.32
External Links:

BARX1 Significantly Regulated by These T(co)Fs

T(co)Fs that Activate BARX1   
T(co)Fs that Repress BARX1
The Intensity of the Gene Regulated by T(co)Fs:
BARX1-T(co)F Pairs
Target
Gene		 T(co)F Knock
-Method		 Tissue Type Biosample
Name		 Fold
Change		 Log2FC P-value Corrected
_P		 Dataset ID
BARX1 SPDEF shRNA Mammary_gland MCF7 0.24296 -2.04119 0.40627 0.99999 DataSet_01_107
BARX1 FOXM1 siRNA Central_nervous_system U87 1.95828 0.96958 - - DataSet_01_122
BARX1 ZNF43 siRNA Gastrointestinal_tissue GIST-T1 0.65762 -0.60467 0.00125 0.0238 DataSet_01_125
BARX1 ZNF431 siRNA Gastrointestinal_tissue GIST-T1 0.61634 -0.69821 0.00046 0.00507 DataSet_01_128
BARX1 IKZF2 shRNA Haematopoietic_and_lymphoid_tissue JURKAT 6.24102 2.64178 9.69702e-06 0.00237 DataSet_01_137
BARX1 POLR3A siRNA Mammary_gland MCF7 4.23438 2.08215 - - DataSet_01_139
BARX1 STAT1 shRNA Haematopoietic_and_lymphoid_tissue JURKAT 6.01704 2.58905 0.00078 0.04062 DataSet_01_154
BARX1 HSF1 shRNA Skin A375 1.62373 0.69932 0.01262 0.07693 DataSet_01_155
BARX1 HOXB7 siRNA Pancreas MIA PaCa-2 1.98896 0.99202 0.20153 0.66821 DataSet_01_169
BARX1 GATA2 siRNA Prostate LNCaP 0.30271 -1.72397 0.23657 0.36244 DataSet_01_193
BARX1 CREB1 shRNA Parotid_gland HSY 0.48003 -1.05881 0.00654 0.34992 DataSet_01_195
BARX1 TP63 siRNA Immortalized_keratinocyte HaCaT RG 1.89417 0.92156 - - DataSet_01_196
BARX1 TP63 siRNA Head_and_neck SCC-1 0.53652 -0.8983 - - DataSet_01_198
BARX1 TP63 siRNA Immortalized_keratinocyte HaCaT 0.58769 -0.76687 - - DataSet_01_200
BARX1 TP63 siRNA Head_and_neck SCC-012 1.60229 0.68013 - - DataSet_01_201
BARX1 XBP1 shRNA Mammary_gland MDA-MB-231 1.53403 0.61733 0.00095 0.01687 DataSet_01_204
BARX1 FOXP1 siRNA Haematopoietic_and_lymphoid_tissue OCI-Ly10 2.17031 1.1179 - - DataSet_01_208
BARX1 FOXP1 siRNA Haematopoietic_and_lymphoid_tissue OCI-Ly1 0.44102 -1.1811 - - DataSet_01_209
BARX1 FOXP1 siRNA Haematopoietic_and_lymphoid_tissue OCI-Ly7 0.12415 -3.00981 - - DataSet_01_210
BARX1 REST siRNA Prostate LNCaP 2.65308 1.40767 0.06812 0.30355 DataSet_01_211
BARX1 LIN28A siRNA Embryo H9 0.28907 -1.7905 0.00065 0.00945 DataSet_01_215
BARX1 KLF2 shRNA Bone_marrow RPMI8226 0.46664 -1.0996 0.23158 0.79796 DataSet_01_226
BARX1 AR shRNA Prostate CWR22Pc 1.69156 0.75836 0.10941 0.28372 DataSet_01_278
BARX1 ESRRA shRNA Embryo_kidney 293T 0.26949 -1.89168 0.00169 0.30611 DataSet_01_280
BARX1 MSX1 siRNA Tooth Dental Pulp Cells 0.64677 -0.62867 0.30206 0.44085 DataSet_01_281
BARX1 SP3 siRNA Haematopoietic_and_lymphoid_tissue JURKAT 1.84906 0.88679 0.03777 0.80567 DataSet_01_290
BARX1 SNAI2 siRNA Mammary_gland MCFDCIS 0.64425 -0.6343 0.21745 0.73858 DataSet_01_292
BARX1 POSTN shRNA Brain GSC272 3.75782 1.9099 0.01792 0.4874 DataSet_01_293
BARX1 TFAP4 siRNA Brain BE(2)-C 0.12967 -2.94707 0.23825 0.51625 DataSet_01_295
BARX1 PTEN shRNA Skin A431 1.5777 0.65782 0.74238 0.85643 DataSet_01_301
BARX1 PTEN shRNA Mammary_gland SKBR3 2.10985 1.07714 0.84077 0.95091 DataSet_01_303
BARX1 HIF1A siRNA Oral_cavity OEC-M1 0.48602 -1.0409 0.03053 0.85151 DataSet_01_348
BARX1 CDX2 siRNA Colon COLO320 1.88582 0.91519 - - DataSet_01_357
BARX1 PTBP1 shRNA Haematopoietic_and_lymphoid_tissue K562 0.38462 -1.37851 0.06273 0.26474 DataSet_02_144
BARX1 DROSHA shRNA Haematopoietic_and_lymphoid_tissue K562 0.15789 -2.66297 0.02375 0.51061 DataSet_02_145
BARX1 FIP1L1 shRNA Haematopoietic_and_lymphoid_tissue K562 2.66667 1.41504 0.05246 0.15803 DataSet_02_147
BARX1 SRSF4 shRNA Haematopoietic_and_lymphoid_tissue K562 1.8 0.848 0.1105 0.4277 DataSet_02_154
BARX1 HNRNPUL1 shRNA Haematopoietic_and_lymphoid_tissue K562 0.52632 -0.926 0.05817 0.51515 DataSet_02_156
BARX1 MXI1 siRNA Haematopoietic_and_lymphoid_tissue K562 0.66129 -0.59664 0.34052 1 DataSet_02_173
BARX1 CEBPZ siRNA Haematopoietic_and_lymphoid_tissue K562 0.58333 -0.77761 0.12618 1 DataSet_02_176
BARX1 STAT5A siRNA Haematopoietic_and_lymphoid_tissue K562 1.82927 0.87127 0.16696 1 DataSet_02_182
BARX1 MAFK siRNA Haematopoietic_and_lymphoid_tissue K562 0.64865 -0.62449 0.32769 1 DataSet_02_183
BARX1 KAT2B siRNA Haematopoietic_and_lymphoid_tissue K562 0.48 -1.05889 0.16455 1 DataSet_02_184
BARX1 BHLHE40 siRNA Haematopoietic_and_lymphoid_tissue K562 3 1.58496 0.09489 1 DataSet_02_186
BARX1 CDAN1 siRNA Haematopoietic_and_lymphoid_tissue K562 0.6 -0.73697 0.2591 1 DataSet_02_197
BARX1 TAL1 siRNA Haematopoietic_and_lymphoid_tissue K562 0.16216 -2.62449 0.32692 1 DataSet_02_201
BARX1 BRCA1 siRNA Haematopoietic_and_lymphoid_tissue K562 0.53226 -0.9098 0.0523 1 DataSet_02_202
BARX1 AR siRNA Prostate abl cells 0.514658 -0.958314 0.0808989511357564 0.999852161656754 DataSet_03_004
BARX1 AR siRNA Prostate LNCaP 2.14024 1.09777 0.142266840273562 1 DataSet_03_005
BARX1 BCL6 siRNA Lymph OCI-Ly7 DLBCL 0.482893 -1.05023 0.313547598051946 0.856302416744531 DataSet_03_025
BARX1 BCL6 siRNA Lymph Pfeiffer DLBCL 1.85564 0.891919 0.0842313364796319 0.550348532717437 DataSet_03_026
BARX1 GATA4 siRNA Stomach AGS 0.464949 -1.10485 0.138748194937532 0.793396398566744 DataSet_03_105
BARX1 GATA4 siRNA Stomach YCC3 0.416844 -1.26242 0.283922204694984 0.780634137076193 DataSet_03_107
BARX1 GATA6 siRNA Stomach AGS 0.183225 -2.44831 0.0286225367748072 0.412938730085576 DataSet_03_108
BARX1 GATA6 siRNA Stomach YCC3 2.23122 1.15783 0.30688818895652 0.85037873549421 DataSet_03_110
BARX1 GFP siRNA Mammary_gland BT-20 cells 0.5 -1 0.0342818248215434 0.546410779049003 DataSet_03_111
BARX1 HNF4a siRNA Liver HepG2 3.24561 1.69849 0.00597485056655246 0.438594539046418 DataSet_03_126
BARX1 KLF5 siRNA Stomach AGS 0.390902 -1.35512 0.0794702754267936 0.549948437746393 DataSet_03_149
BARX1 MEF2D shRNA Liver HuH7 0.0660498 -3.9203 - - DataSet_03_162
BARX1 MYB siRNA Cord_Blood CD34+ progenitor cells 0.462861 -1.11135 - - DataSet_03_170
BARX1 MYC siRNA Colon HT29 29.1546 4.86565 - - DataSet_03_177
BARX1 MYC siRNA Central_nervous_system DAOY M2.1 0.546726 -0.87111 1.66391358774193e-05 7.57771792692984e-05 DataSet_03_178
BARX1 MYCN CRISPR Neuroblastoma CHP-134 0.645943 -0.630521 0.000742977816754886 0.00840572376334204 DataSet_03_183
BARX1 MYCN CRISPR Neuroblastoma CHP-134 0.645943 -0.630521 0.000742977816754886 0.00840572376334204 DataSet_03_184
BARX1 NR2F2 siRNA Uterus Primary eutopic stromal cells 1.63738 0.71139 0.143349658361914 0.99947668859931 DataSet_03_202
BARX1 PRRX1 CRISPR Neuroblastoma 691-MES 0.502967 -0.991463 0.0305028179837324 0.89189998148014 DataSet_03_217
BARX1 SOX2 CRISPR Seminoma-like TCam-2 0.627585 -0.672117 0.115136098286076 0.999580851453413 DataSet_03_244
BARX1 SOX2 siRNA Mammary_gland GSC-11 0.632111 -0.66175 0.285068784641327 0.544628367803804 DataSet_03_245
BARX1 STAT3 CRISPR Embryo hESC 0.549483 -0.863852 0.201719001094643 0.27179901826032 DataSet_03_258
BARX1 STAT6 siRNA Umbilical_vein HUVEC 0.193277 -2.37126 0.584751338808136 0.936578193251035 DataSet_03_264
BARX1 TET1 siRNA Embryo NCCIT 1.52852 0.612135 7.01361042869495e-05 0.0030280158019131 DataSet_03_269
BARX1 TET2 siRNA Embryo NCCIT 1.88535 0.914835 6.03365245143266e-06 0.000769865424747524 DataSet_03_270
BARX1 TFAP2C siRNA Mammary_gland MCF7 1.54353 0.626233 0.476354938254827 0.746874359168504 DataSet_03_274
BARX1 TFE3 siRNA Kidney UOK257-2 0.24319 -2.03984 - - DataSet_03_275
BARX1 CIZ1 CRISPR Haematopoietic_and_lymphoid_tissue K562 2.21429 1.14684 0.238219928065405 0.337616247537336 DataSet_04_004
BARX1 CTCF CRISPR Haematopoietic_and_lymphoid_tissue K562 0.464286 -1.10691 0.11888177066757 0.454467307460031 DataSet_04_005
BARX1 EIF2AK2 CRISPR Haematopoietic_and_lymphoid_tissue K562 3.14286 1.65208 0.131840577654912 0.514399644602156 DataSet_04_008
BARX1 NKRF shRNA Haematopoietic_and_lymphoid_tissue K562 41.0114 5.35795 0.00109652442764341 0.0132632578306496 DataSet_04_014
BARX1 SMAD5 CRISPR Haematopoietic_and_lymphoid_tissue K562 1.57143 0.652077 0.327603217828754 0.645123600456732 DataSet_04_020
BARX1 ACTN4 CRISPR Haematopoietic_and_lymphoid_tissue K562 0.16129 -2.63227 0.0486731923549561 0.16817877601027 DataSet_04_048
BARX1 CITED2 CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.204545 -2.28951 0.00541876253056936 0.119535699006184 DataSet_02_38
BARX1 DPF2 CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.193182 -2.37197 0.00415992871628137 0.021577739963897 DataSet_02_14
BARX1 ERF CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.488636 -1.03317 0.143636226412107 0.280232172904066 DataSet_02_34
BARX1 HMGA1 CRISPRi Haematopoietic_and_lymphoid_tissue K562 9.33333 3.22239 0.134345784545851 0.529867290096922 DataSet_02_75
BARX1 HMGN3 CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.125 -3 0.0397797184504402 0.49177649610897 DataSet_02_45
BARX1 LDB1 CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.454545 -1.1375 0.0245858637318274 0.074258414345575 DataSet_02_35
BARX1 NFE2L1 CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.352273 -1.50524 0.0770886743961249 0.401579135251022 DataSet_02_32
BARX1 SMARCA4 CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.340909 -1.55254 0.00718000855370025 0.0311972284629129 DataSet_02_47
BARX1 TBL1XR1 CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.534091 -0.904843 0.0857163487496078 0.202253096995725 DataSet_02_43
BARX1 TEAD2 CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.431818 -1.2115 0.0961876372007668 0.188210473691802 DataSet_02_33
BARX1 TLE2 CRISPRi Haematopoietic_and_lymphoid_tissue K562 0.443182 -1.17403 0.0331597945522476 0.107699202884725 DataSet_02_53
BARX1 CNOT7 shRNA Haematopoietic_and_lymphoid_tissue K562 8.66667 3.11548 0.142288508956561 0.314014491023314 DataSet_04_061
BARX1 NFKBIZ knockout Colon Colon organoid 0.24191 -2.04746 1.240958e-02 0.543626104 DataSet_03_323
BARX1 AEBP1 siRNA Umbilical_vein HUVEC 0.569589 -0.812008 3.037710e-01 0.866858566 DataSet_03_300
BARX1 ELF3 CRISPR Bile_duct HBDEC2 7.7177 2.94817 9.166051e-04 5.725485e-03 DataSet_03_304
BARX1 ELF3 knockdown Bile_duct HBDEC2 0.641882 -0.63962 2.423630e-01 3.871990e-01 DataSet_03_305
BARX1 ACTR5 siRNA Muscle RD 0.478249 -1.06417 - - DataSet_03_343
BARX1 INO80 siRNA Muscle RD 1.94402 0.95904 - - DataSet_03_344
BARX1 SKI CRISPR Blood HL60 0.382353 -1.38702 1.148265e-02 0.201786760 DataSet_03_351
BARX1 ESR1 siRNA Mammary_gland MCF7 1.52996 0.613491 2.342644e-01 0.4865667709 DataSet_03_352
BARX1 ETV5 knockdown Colon HT29 0.321429 -1.63743 6.350475e-02 0.285743568 DataSet_03_353
BARX1 PARP1 siRNA Prostate LNCaP 2.72581 1.44669 2.305740e-01 0.527845645 DataSet_03_354
BARX1 TET1 CRISPR Mammary_gland Hs578T 0.204649 -2.28878 2.315784e-01 4.191773e-01 DataSet_03_355
BARX1 CREBBP CRISPR Brain U5-NPC 2 1 0.8034016069 0.8799256 DataSet_03_356
BARX1 PTPN14 CRISPR Brain U5-NPC 2 1 7.429099e-01 0.84227886 DataSet_03_357
BARX1 TP53 CRISPR Brain U5-NPC 6 2.58496 3.161167e-01 4.452484e-01 DataSet_03_358
BARX1 NCOA2 siRNA Uterus endometrial stromal cells 0.333333 -1.58496 0.2985747252 1 DataSet_03_360
BARX1 TP53 knockout Stomach SNU1 2.76551 1.46755 0.7665158403 0.9941460 DataSet_03_365
BARX1 USP22 shRNA Liver PLC_PRF_5 cells 0.010989 -6.50779 3.760558e-04 0.04960608 DataSet_03_368
BARX1 TPR shRNA Bone_marrow U2OS 3.62192 1.85676 2.050328e-02 2.111203e-01 DataSet_03_370
BARX1 E2F1 siRNA Nasopharynx HK1 0.647059 -0.628031 7.262424e-01 1.000000e+00 DataSet_03_373
BARX1 ZNF213 siRNA Mammary_gland MCF7 0.000950286 -10.0393 3.358538e-01 6.592819e-01 DataSet_03_376
BARX1 EZH2 CRISPR Ovary SKOV3 2.69767 1.43172 5.046434e-01 0.6674472448 DataSet_03_378
BARX1 DNMT1 siRNA Skin Human melanoma cells 2.86866 1.52038 3.708327e-01 4.825698e-01 DataSet_03_382
BARX1 YY1 shRNA Brain GSC1517 0.037037 -4.75489 - - DataSet_03_384
BARX1 RELA CRISPR Brain T30 3.57948 1.83975 0.4131778316 0.8400824 DataSet_03_399
BARX1 HMGA1 shRNA Bile_duct HUCCT1 2.77692 1.47349 6.020475e-04 0.028880141 DataSet_03_400
BARX1 EHF shRNA Stomach MKN7 0.526496 -0.925506 - - DataSet_03_402
BARX1 TFAP2A knockout Embryo H9 10.5 3.39232 2.071246e-02 0.09134812 DataSet_03_405
BARX1 CHD1 shRNA Prostate LNCaP 1.61728 0.693573 9.009904e-02 5.846417e-01 DataSet_03_407
BARX1 STRAP knockout Nerve SK-N-AS 1.96706 0.976039 - - DataSet_03_409
BARX1 SIRT1 siRNA Pancreas PANC1 1.524 0.607858 5.277270e-04 0.015550500 DataSet_03_410
BARX1 E2F1 siRNA Prostate LNCaP 0.425532 -1.23266 4.108195e-02 0.5066243911 DataSet_03_413
BARX1 BRD4 CRISPR Lymph CD8+ T cells 9 3.16992 - - DataSet_03_420
BARX1 PRDM1 CRISPR Lymph CD8+ T cells 2.5 1.32193 - - DataSet_03_421
BARX1 FOXQ1 CRISPR Lymph Primary CD4+ T cells 1.90123 0.926937 - - DataSet_03_422
BARX1 MAEL CRISPR Liver Alexander cells 2.66667 1.41504 - - DataSet_03_423
BARX1 FOXP3 CRISPR Peripheral_blood Naive Treg 12.25 3.61471 2.000217e-01 0.554753845 DataSet_03_427
BARX1 CIC knockout Brain Immortalized Astrocyte Cells 0.5 -1 6.275163e-01 8.691493e-01 DataSet_03_438
BARX1 FOXA2 CRISPR Liver iPSCs-derived progenitors and mature hepatocytes 0.333333 -1.58496 6.394733e-01 0.97991880 DataSet_03_439
BARX1 CAMTA1 knockout Embryo_kidney HEK293T 13.4567 3.75025 5.840891e-05 0.04476915 DataSet_03_448
BARX1 CBX2 siRNA Mammary_gland MCF7 1.53922 0.622202 6.040410e-01 0.7531217920 DataSet_03_451
BARX1 OGT siRNA Embryo BeWo cells 0.6 -0.736966 3.666276e-01 0.70974061 DataSet_03_453
BARX1 TXNIP shRNA Cord_Blood CD34+ cells 0.333333 -1.58496 - - DataSet_03_461
BARX1 SMARCA1 Cas13 Embryo_kidney HEK293T 0.420168 -1.25096 - - DataSet_03_466
BARX1 EZH2 siRNA Prostate LNCaP 0.150708 -2.73017 - - DataSet_03_472
BARX1 APTX CRISPR Haematopoietic_and_lymphoid_tissue K562 6.5 2.70044 0.3952965 0.795899 DataSet_04_072
Regulation Region
 
T(co)Fs that significantly regulate YY1 by the evidences of both expression and ChIP-seq/motif
Expression Atlas of BARX1
Gene Expression in Human Normal Tissues (GTEx) Gene Expression in Cancer Cell Lines (CCLE)
Gene Expression in Human Cancers (TCGA) Gene Expression in Encode Cell Lines